DNA Binding Motif

						

			
Accessions: 4euw_A (3D-footprint 20231221)

			
Names: Transcription factor SOX-9
Organisms: Homo sapiens
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: Crystal structure of a HMG domain of transcription factor SOX-9 bound to DNA (SOX-9/DNA) from Homo sapiens at 2.77 A resolution
Length: 6
Consensus: TcAAAg
Weblogo: 
PSSM: P0      A      C      G      T
01      0      0      0     96      T
02     12     60     12     12      c
03     96      0      0      0      A
04     84      0     12      0      A
05     96      0      0      0      A
06     12     12     60     12      g
Binding TFs: 4euw_A (HMG (high mobility group) box, Domain of unknown function (DUF1898))
Binding Sites: 4euw_B
4euw_C
			
	
			


			

				

				
				
				
				

			

			

		

	
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