DNA Binding Motif

Accessions: 4s0h_F (3D-footprint 20231221)
Names: Homeobox protein Nkx-2.5
Organisms: Homo sapiens
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: TBX5 DB, NKX2.5 HD, ANF DNA Complex
Length: 5
Consensus: aAGtG
01 57 13 13 13 a
02 96 0 0 0 A
03 0 0 96 0 G
04 13 13 13 57 t
05 0 0 96 0 G
Binding TFs: 4s0h_F (Homeobox domain)
Binding Sites: 4s0h_G
Publications: Pradhan L, Gopal S, Li S, Ashur S, Suryanarayanan S, Kasahara H, Nam HJ. Intermolecular Interactions of Cardiac Transcription Factors NKX2. 5 and TBX5 55:1702-10 (Biochemistry.). [Pubmed]

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