DNA Binding Motif

						

			
Accessions: ONECUT2_methyl_3 (HT-SELEX2 May2017)

			
Names: ONECUT2
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 11
Consensus: kTATTGATTwt
Weblogo: 
PSSM: P0      A      C      G      T
01  19060  10139  38221  45083      k
02      0    154      0 112503      T
03 112503    545    647    935      A
04      0    320    548 112503      T
05      0   7849      0 112503      T
06    239    320 112503    625      G
07 112503    362    237    568      A
08      0      0    147 112503      T
09      0  12680      0 112503      T
10  44472   3439  37998  68031      w
11  20944  14579  23387  53593      t
Binding TFs: ONECUT2 (Homeobox domain, CUT domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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