DNA Binding Motif

						

			
Accessions: ken_SOLEXA_5_FBgn0011236 (FlyZincFinger 1.0 )

			
Names: CG5575
Organisms: Drosophila melanogaster
Libraries: FlyZincFinger 1.0  1
1 Enuameh MS et al (2013) Global analysis of Drosophila Cys2-His2 zinc finger proteins reveals a multitude of novel recognition motifs and binding determinants. Genome Res. 23(6):928-40. doi: 10.1101/gr.151472.112 [Pubmed]
Length: 15
Consensus: mcmcrGwGAAAGyav
Weblogo: 
PSSM: P0      A      C      G      T
01    133    190    123     77      m
02    124    192    125     93      c
03    147    199    110     80      m
04    131    181    119    105      c
05    208     20    269     39      r
06     45      1    467     23      G
07    247     11     18    260      w
08      0      0    530      6      G
09    527      0      0      9      A
10    532      2      1      1      A
11    535      0      0      1      A
12      2      0    528      6      G
13      2    184     46    304      y
14    215     89    121    108      a
15    133    147    151     64      v
Binding TFs: ken (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger)
			
Publications: Enuameh MS et al (2013) Global analysis of Drosophila Cys2-His2 zinc finger proteins reveals a multitude of novel recognition motifs and binding determinants. Genome Res. 23(6):928-40. doi: 10.1101/gr.151472.112 [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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