DNA Binding Motif

						

			
Accessions: 1b72_A (3D-footprint 20231221)

			
Names: PROTEIN (HOMEOBOX PROTEIN HOX-B1)
Organisms: Homo sapiens
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: PBX1, HOMEOBOX PROTEIN HOX-B1/DNA TERNARY COMPLEX
Length: 4
Consensus: TTCa
Weblogo: 
PSSM: P0      A      C      G      T
01     16      0      8     72      T
02      0      0      0     96      T
03      8     72      8      8      C
04     48     16     16     16      a
Binding TFs: 1b72_A (Homeobox domain)
Binding Sites: 1b72_D
1b72_E
			
Publications: Piper D.E, Batchelor A.H, Chang C.P, Cleary M.L, Wolberger C. Structure of a HoxB1-Pbx1 heterodimer bound to DNA: role of the hexapeptide and a fourth homeodomain helix in complex formation. Cell 96:587-97 (1999). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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