DNA Binding Motif

						

			
Accessions: SlyA (RegulonDB 7.5)

			
Names: SlyA, SlyA DNA-binding transcriptional activator
Organisms: ECK12
Libraries: RegulonDB 7.5 1
1 Salgado H, Peralta-Gil M, Gama-Castro S, Santos-Zavaleta A, Muniz-Rascado L, Garcia-Sotelo JS, Weiss V, Solano-Lira H, Martinez-Flores I, Medina-Rivera A, Salgado-Osorio G, Alquicira-Hernandez S, Alquicira-Hernandez K, Lopez-Fuentes A, Porron-Sotelo L, Huerta AM, Bonavides-Martinez C, Balderas-Martinez YI, Pannier L, Olvera M, Labastida A, Jimenez-Jacinto V, Vega-Alvarado L, Del Moral-Chavez V, Hernandez-Alvarez A, Morett E, Collado-Vides J. RegulonDB v8.0: omics data sets, evolutionary conservation, regulatory phrases, cross-validated gold standards and more. Nucleic Acids Res. 2013 Jan 1;41(D1):D203-D213. [Pubmed]
Length: 11
Consensus: ATawTtAmAGA
Weblogo: 
PSSM: P0      A      C      G      T
01      6      0      0      0      A
02      0      0      1      5      T
03      4      1      0      1      a
04      2      0      1      3      w
05      1      0      0      5      T
06      1      0      1      4      t
07      5      0      1      0      A
08      3      2      0      1      m
09      5      0      0      1      A
10      0      0      6      0      G
11      6      0      0      0      A
Binding TFs: ECK120007927 (MarR family, MarR family, Winged helix DNA-binding domain)
Binding Sites: ECK120012255
ECK120014028
ECK120033896
ECK120033898
ECK120033900
ECK120033902
			
	
			


			

				

				
				
				
				

			

			

		

	
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