DNA Binding Motif
| Accessions: | MA2452.1 (JASPAR 2024) |
| Names: | SPL8A |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | DAP-seq |
| Length: | 9 |
| Consensus: | ATAGTACTm |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 15331 1982 1759 671 A 02 1428 469 446 17400 T 03 18166 260 723 594 A 04 170 906 18101 566 G 05 89 130 84 19440 T 06 19423 85 114 121 A 07 555 17764 1031 393 C 08 909 307 840 17687 T 09 5546 12068 600 1529 m |
| Binding Sites: | MA2452.1.1 / MA2452.1.13 / MA2452.1.19 / MA2452.1.4 / MA2452.1.7 MA2452.1.10 MA2452.1.11 / MA2452.1.8 MA2452.1.12 MA2452.1.14 MA2452.1.15 MA2452.1.16 MA2452.1.17 MA2452.1.18 MA2452.1.2 / MA2452.1.6 MA2452.1.20 MA2452.1.3 MA2452.1.5 MA2452.1.9 |
| Publications: | Yamasaki K, Kigawa T, Inoue M, Yamasaki T, Yabuki T, Aoki M, Seki E, Matsuda T, Tomo Y, Terada T, Shirouzu M, Tanaka A, Seki M, Shinozaki K, Yokoyama S. An Arabidopsis SBP-domain fragment with a disrupted C-terminal zinc-binding site retains its tertiary structure. FEBS Lett 580:2109-16 (2006). [Pubmed] |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.