DNA Binding Motif

						

			
Accessions: MA0093.4 (JASPAR 2024)

			
Names: USF1
Organisms: Homo sapiens
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: ChIP-seq
Length: 10
Consensus: GTCATGTGAC
Weblogo: 
PSSM: P0      A      C      G      T
01   7574   3030  43094   1636      G
02   3841   9543   3912  38038      T
03    533  53536    766    499      C
04  53654    654    477    549      A
05    418  13185   3666  38065      T
06   3453   1387  50076    418      G
07    448    264    601  54021      T
08    403    817  53634    480      G
09  45587   3045   4679   2023      A
10   1845  41450   3018   9021      C
Type: Heterodimer
Binding TFs: P22415 (Helix-loop-helix DNA-binding domain)
P22415
Binding Sites: MA0093.4.1 / MA0093.4.9
MA0093.4.10 / MA0093.4.2
MA0093.4.11
MA0093.4.12 / MA0093.4.13
MA0093.4.14 / MA0093.4.7
MA0093.4.15 / MA0093.4.6
MA0093.4.16
MA0093.4.17
MA0093.4.18
MA0093.4.19
MA0093.4.20
MA0093.4.3
MA0093.4.4
MA0093.4.5
MA0093.4.8
			
Publications: Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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