DNA Binding Motif

						

			
Accessions: M0551 (AthalianaCistrome v4_May2016)

			
Names: MYB105.ampDAP, T02979;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 17
Consensus: hgwtwwwTAACGGwwwy
Weblogo: 
PSSM: P0      A      C      G      T
01    201    153     85    147      h
02    122    126    216    122      g
03    204     30    126    226      w
04    145     54     56    331      t
05    256     95     49    186      w
06    234     58    117    177      w
07    242     86     52    206      w
08      0     12      0    574      T
09    586      0      0      0      A
10    586      0      0      0      A
11      0    586      0      0      C
12     18     60    438     70      G
13     89      0    497      0      G
14    151     50      0    385      w
15    245     81     26    234      w
16    208     42     22    314      w
17    111    158     57    260      y
Binding TFs: T02979 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.