DNA Binding Motif
| Accessions: | UP00371A_1 (UniPROBE 20160601) |
| Names: | C02B8.4, CeTwist, Helix-loop-helix protein 8, HLH-8, Twist-related protein |
| Organisms: | Caenorhabditis elegans |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Length: | 14 |
| Consensus: | wtaAAwaAAacymw |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 0.42 0.13 0.18 0.27 w 02 0.20 0.24 0.17 0.39 t 03 0.41 0.17 0.20 0.22 a 04 0.68 0.09 0.09 0.14 A 05 0.70 0.11 0.09 0.10 A 06 0.26 0.09 0.09 0.56 w 07 0.60 0.17 0.14 0.09 a 08 0.70 0.12 0.03 0.16 A 09 0.72 0.12 0.12 0.04 A 10 0.66 0.10 0.07 0.17 a 11 0.10 0.62 0.10 0.17 c 12 0.22 0.32 0.18 0.28 y 13 0.39 0.35 0.21 0.05 m 14 0.28 0.05 0.13 0.54 w |
| Binding TFs: | UP00371A (Helix-loop-helix DNA-binding domain) |
| Binding Sites: | AACAGATG AACATATG AACATCTG AACATGTG ACAGATGT ACATATGG ACATATGT ACATCTGG ACATGTGG ACCACATG ACCAGATG ACCATATG CACATCTG CACATGTG CATATGGA CATATGGC CATATGGG CATATGTC CCATATGC CCATATGG |
| Publications: | Grove C.A, De Masi F, Barrasa M.I, Newburger D.E, Alkema M.J, Bulyk M.L, Walhout A.J. A multiparameter network reveals extensive divergence between C. elegans bHLH transcription factors. Cell 138:314-27 (2009). [Pubmed] |
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