DNA Binding Motif
| Accessions: | MA0161.1 (JASPAR 2024) |
| Names: | NFIC |
| Organisms: | Homo sapiens |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | High-throughput SELEX SAGE |
| Length: | 6 |
| Consensus: | yTGGCa |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 358 1832 176 4546 y 02 81 67 300 6464 T 03 81 67 6713 51 G 04 91 88 6643 90 G 05 1226 5364 160 162 C 06 3298 981 1186 1447 a |
| Type: | Heterodimer |
| Binding TFs: | P08651 (CTF/NF-I family transcription modulation region, MH1 domain, Nuclear factor I protein pre-N-terminus) P08651 |
| Binding Sites: | MA0161.1.1 MA0161.1.10 MA0161.1.11 MA0161.1.12 MA0161.1.13 MA0161.1.14 MA0161.1.15 MA0161.1.16 MA0161.1.17 MA0161.1.18 MA0161.1.19 MA0161.1.2 MA0161.1.20 MA0161.1.3 MA0161.1.4 MA0161.1.5 MA0161.1.6 MA0161.1.7 MA0161.1.8 MA0161.1.9 |
| Publications: | Roulet E, Busso S, Camargo A.A, Simpson A.J, Mermod N, Bucher P. High-throughput SELEX SAGE method for quantitative modeling of transcription-factor binding sites. Nature biotechnology 20:831-5 (2002). [Pubmed] |
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