DNA Binding Motif
| Accessions: | UP00469A_1 (UniPROBE 20160601) |
| Names: | Sterol UpTake, Sut1 |
| Organisms: | Saccharomyces cerevisiae |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Length: | 22 |
| Consensus: | dwttmyrAAsTCCGrrmhwsrg |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 0.31 0.09 0.28 0.32 d 02 0.29 0.13 0.22 0.36 w 03 0.23 0.23 0.21 0.33 t 04 0.17 0.23 0.24 0.36 t 05 0.25 0.31 0.20 0.24 m 06 0.16 0.34 0.19 0.31 y 07 0.47 0.08 0.40 0.05 r 08 0.94 0 0.01 0.04 A 09 0.97 0 0.01 0.02 A 10 0 0.63 0.37 0 s 11 0 0.03 0 0.97 T 12 0 0.99 0 0.01 C 13 0 0.99 0 0 C 14 0 0 0.99 0 G 15 0.61 0.01 0.33 0.05 r 16 0.31 0.06 0.51 0.12 r 17 0.50 0.27 0.13 0.11 m 18 0.28 0.26 0.16 0.29 h 19 0.48 0.10 0.08 0.33 w 20 0.16 0.26 0.34 0.23 s 21 0.29 0.18 0.32 0.21 r 22 0.23 0.22 0.34 0.21 g |
| Binding TFs: | UP00469A |
| Binding Sites: | AAACTCCG AAAGTCCG AACTCCGA AACTCCGC AACTCCGG AACTCCGT AAGTCCGA AAGTCCGG ACCGGAGT ACTCCGAA ACTCCGAG ACTCCGAT ACTCCGGA ACTCCGGG CAACTCCG CAAGTCCG CGGACTTA CGGACTTC CGGAGTTA CGGAGTTC |
| Publications: | Gordân R, Murphy KF, McCord RP, Zhu C, Vedenko A, Bulyk ML. Curated collection of yeast transcription factor DNA binding specificity data reveals novel structural and gene regulatory insights. Genome Biol : (2011). [Pubmed] |
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