DNA Binding Motif

						

			
Accessions: M0671 (AthalianaCistrome v4_May2016)

			
Names: NTL8.DAP, T10527;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 19
Consensus: kTTyCTTCwyyytsARGwA
Weblogo: 
PSSM: P0      A      C      G      T
01    136    116    189    150      k
02     23      4     21    543      T
03     86      5     10    490      T
04    101    184     87    219      y
05      0    591      0      0      C
06      0     71      0    520      T
07      0      5      0    586      T
08     36    456     46     53      C
09    291     67     81    152      w
10    121    162     71    237      y
11     78    236    110    167      y
12    146    151     96    198      y
13    104    116    145    226      t
14     95    184    168    144      s
15    524      5     45     17      A
16    402      7    181      1      R
17      0      3    588      0      G
18    200     78     74    239      w
19    453     25      0    113      A
Binding TFs: T10527 (No apical meristem (NAM) protein)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.