DNA Binding Motif

						

			
Accessions: 1a1g_A (3D-footprint 20231221)

			
Names: DSNR ZINC FINGER PEPTIDE
Organisms: Mus musculus
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: DSNR (ZIF268 VARIANT) ZINC FINGER-DNA COMPLEX (GCGT SITE)
Length: 8
Consensus: GCCCaCGC
Weblogo: 
PSSM: P0      A      C      G      T
01      3      6     82      5      G
02      0     95      1      0      C
03      0     95      1      0      C
04      1     92      1      2      C
05     56      8      9     23      a
06      3     86      3      4      C
07      9      4     82      1      G
08      5     83      4      4      C
Binding TFs: 1a1g_A (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger, C2H2-type zinc finger)
Binding Sites: 1a1g_B
1a1g_C
			
Publications: Elrod-Erickson M, Benson T.E, Pabo C.O. High-resolution structures of variant Zif268-DNA complexes: implications for understanding zinc finger-DNA recognition. Structure (London, England : 1993) 6:451-64 (1998). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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