DNA Binding Motif
| Accessions: | MA2022.2 (JASPAR 2024) |
| Names: | LOB |
| Organisms: | Arabidopsis thaliana |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Length: | 13 |
| Consensus: | CCGCCGCCGCmgc |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 65 553 74 103 C 02 116 569 24 86 C 03 92 18 552 133 G 04 7 760 10 18 C 05 28 739 4 24 C 06 39 4 729 23 G 07 4 768 7 16 C 08 39 721 8 27 C 09 37 1 733 24 G 10 14 693 38 50 C 11 250 398 44 103 m 12 129 33 532 101 g 13 73 538 71 113 c |
| Type: | Heterodimer |
| Binding TFs: | Q9FML4 (Protein of unknown function DUF260) Q9FML4 |
| Binding Sites: | MA2022.2.16 / MA2022.2.17 / MA2022.2.5 MA2022.2.1 MA2022.2.10 MA2022.2.11 MA2022.2.12 MA2022.2.13 MA2022.2.14 MA2022.2.15 MA2022.2.18 MA2022.2.19 MA2022.2.2 MA2022.2.20 MA2022.2.3 MA2022.2.4 MA2022.2.6 MA2022.2.7 MA2022.2.8 MA2022.2.9 |
| Publications: | Husbands A, Bell EM, Shuai B, Smith HM, Springer PS. LATERAL ORGAN BOUNDARIES defines a new family of DNA-binding transcription factors and can interact with specific bHLH proteins. Nucleic Acids Res : (2007;35(19):6663-71.). [Pubmed] |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.