DNA Binding Motif

						

			
Accessions: 1glu_AB (3D-footprint 20231221)

			
Names: PROTEIN (GLUCOCORTICOID RECEPTOR)
Organisms: Rattus norvegicus
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: CRYSTALLOGRAPHIC ANALYSIS OF THE INTERACTION OF THE GLUCOCORTICOID RECEPTOR WITH DNA
Length: 15
Consensus: GnnnnnnnnTGTnCT
Weblogo: 
PSSM: P0      A      C      G      T
01      7      9     73      7      G
02     24     24     24     24      n
03     24     24     24     24      n
04     24     24     24     24      n
05     24     24     24     24      n
06     24     24     24     24      n
07     24     24     24     24      n
08     24     24     24     24      n
09     24     24     24     24      n
10      0      0      0     96      T
11      0      0     96      0      G
12      7      7      7     75      T
13     24     24     24     24      n
14      7     81      0      8      C
15     14      7      7     68      T
Binding TFs: 1glu_A / 1glu_B (Zinc finger, C4 type (two domains))
Binding Sites: 1glu_C / 1glu_D
			
Publications: Luisi B. F., Xu W. X., Otwinowski Z., Freedman L. P., Yamamoto K. R., Sigler P. B. Crystallographic analysis of the interaction of the glucocorticoid receptor with DNA. Nature 352:497-505 (1991). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.