DNA Binding Motif
| Accessions: | 4ihx_B (3D-footprint 20231221) |
| Names: | DNA-binding protein fis |
| Libraries: | 3D-footprint 20231221 1 1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed] |
| Description: | Crystal structure of Fis bound to 27 bp 2-Aminopurine substituted DNA F28-2AP (AAATTTGTTTGA2T2TTGAGCAAATTT) |
| Length: | 5 |
| Consensus: | TGTTT |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 0 0 0 96 T 02 0 0 96 0 G 03 9 9 9 69 T 04 9 9 9 69 T 05 9 11 9 67 T |
| Binding TFs: | 4ihx_B (Bacterial regulatory protein, Fis family) |
| Binding Sites: | 4ihx_C 4ihx_D |
| Publications: | Hancock S.P, Ghane T, Cascio D, Rohs R, Di Felice R, Johnson R.C. Control of DNA minor groove width and Fis protein binding by the purine 2-amino group. Nucleic acids research 41:6750-60 (2013). [Pubmed] |
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