DNA Binding Motif
| Accessions: | MA1831.2 (JASPAR 2024) |
| Names: | Zm00001d031796 |
| Organisms: | Zea mays |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | ChIP-seq |
| Length: | 10 |
| Consensus: | sACGGCGACg |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 1680 3534 7250 1357 s 02 11164 807 1352 498 A 03 199 13089 257 276 C 04 309 323 13025 164 G 05 1454 655 11443 269 G 06 227 13138 239 217 C 07 282 514 12856 169 G 08 10265 1019 2008 529 A 09 242 12691 634 254 C 10 2022 2882 7673 1244 g |
| Type: | Heterodimer |
| Binding TFs: | A0A060D609 (AP2 domain) A0A060D609 |
| Binding Sites: | MA1831.2.9 MA1831.2.1 / MA1831.2.4 MA1831.2.10 MA1831.2.11 MA1831.2.12 MA1831.2.13 MA1831.2.14 MA1831.2.15 MA1831.2.16 MA1831.2.17 MA1831.2.18 MA1831.2.19 MA1831.2.2 MA1831.2.20 MA1831.2.3 MA1831.2.5 MA1831.2.6 MA1831.2.7 MA1831.2.8 |
| Publications: | Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). [Pubmed] |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.