DNA Binding Motif

						

			
Accessions: MA0386.2 (JASPAR 2024)

			
Names: SPT15
Organisms: Saccharomyces cerevisiae
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: PBM
Length: 11
Consensus: GrwATATATAt
Weblogo: 
PSSM: P0      A      C      G      T
01    115     98    701     84      G
02    287    198    266    247      r
03    332    110     27    529      w
04    907      7     25     59      A
05     12      7     23    955      T
06    981      2      4     12      A
07     38      1      5    954      T
08    970      2      6     20      A
09     44      4      3    947      T
10    883     10     24     81      A
11    186     62     94    657      t
Type: Heterodimer
Binding TFs: P13393 (Transcription factor TFIID (or TATA-binding protein, TBP))
P13393
			
Publications: Newburger D.E, Bulyk M.L. UniPROBE: an online database of protein binding microarray data on protein-DNA interactions. Nucleic acids research 37:D77-82 (2009). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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