DNA Binding Motif

						

			
Accessions: GCM1_FIGLA_1 (HumanTF2 1.0)

			
Names: GCM1_FIGLA
Organisms: Homo sapiens
Libraries: HumanTF2 1.0 1
1 Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]
Notes: Site type: heterodimeric; Experiment type: CAP-SELEX
Length: 15
Consensus: CAssTGsaCCCgCAy
Weblogo: 
PSSM: P0      A      C      G      T
01     30   1107     12     20      C
02   1107    125     56     48      A
03     19    629    478     47      s
04     28    667    440     30      s
05     41    165     76   1107      T
06     70     94   1107     66      G
07    182    289    428    208      s
08    623    112    260    112      a
09     13   1107     22     23      C
10     50   1107     47     24      C
11    164   1107     43    150      C
12    406    401   1107    224      g
13     12   1107     65    341      C
14   1107    254     96     96      A
15     80    514    207    593      y
Type: Heterodimer
Binding TFs: FIGLA_TF2 (Helix-loop-helix DNA-binding domain)
GCM1_TF1 (GCM motif protein)
			
Publications: Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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