DNA Binding Motif

						

			
Accessions: IRF4_HUMAN.H10MO.C|M01269 (HOCOMOCO 10)

			
Names: IRF4
Organisms: Homo sapiens
Libraries: HOCOMOCO 10 1
1 Kulakovskiy IV, Vorontsov IE, Yevshin IS, Soboleva AV, Kasianov AS, Ashoor H, Ba-Alawi W, Bajic VB, Medvedeva YA, Kolpakov FA, Makeev VJ. HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models. Nucleic Acids Res : (2016). [Pubmed]
Notes: Interferon-regulatory factors{3.5.3}; IRF-4 (LSIRF, NF-EM5, MUM1, Pip){3.5.3.0.4}
Length: 16
Consensus: rrrrrGGAAstGArAs
Weblogo: 
PSSM: P0      A      C      G      T
01    220     38    158     84      r
02    207     45    178     70      r
03    213     36    164     87      r
04    126     49    292     33      r
05    241     40    182     37      r
06    100      2    379     19      G
07     72     23    402      3      G
08    461     13     19      7      A
09    401      4     73     22      A
10     64    147    278     11      s
11     96     28     62    314      t
12     13      8    464     15      G
13    377     15     93     15      A
14    223     58    205     14      r
15    385     46     23     46      A
16     85    175    203     37      s
Binding TFs: IRF4_HUMAN (Interferon regulatory factor transcription factor, Interferon-regulatory factor 3)
			
Publications: Kulakovskiy IV, Vorontsov IE, Yevshin IS, Soboleva AV, Kasianov AS, Ashoor H, Ba-Alawi W, Bajic VB, Medvedeva YA, Kolpakov FA, Makeev VJ. HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models. Nucleic Acids Res : (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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