DNA Binding Motif

						

			
Accessions: EGR2_methyl_1 (HT-SELEX2 May2017)

			
Names: EGR2
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 13
Consensus: hmCGCCCACrCrm
Weblogo: 
PSSM: P0      A      C      G      T
01    897   1056    502    983      h
02   1547   1891     66    148      m
03     24   3438     15     32      C
04    500     14   3438    139      G
05     12   3438      1      9      C
06     11   3438      0     10      C
07      4   3438     12    154      C
08   3438     42      0      0      A
09      1   3438      0      0      C
10   1592      8   3438    753      r
11     43   3438    270    620      C
12   3438    475   1801    330      r
13    943   1233    446    816      m
Binding TFs: EGR2 (Zinc finger, C2H2 type, Domain of unknown function (DUF3446), Zinc-finger double domain, C2H2-type zinc finger)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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