DNA Binding Motif

						

			
Accessions: PO5F1_HUMAN.H10MO.A|M01453 (HOCOMOCO 10)

			
Names: POU5F1
Organisms: Homo sapiens
Libraries: HOCOMOCO 10 1
1 Kulakovskiy IV, Vorontsov IE, Yevshin IS, Soboleva AV, Kasianov AS, Ashoor H, Ba-Alawi W, Bajic VB, Medvedeva YA, Kolpakov FA, Makeev VJ. HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models. Nucleic Acids Res : (2016). [Pubmed]
Notes: POU domain factors{3.1.10}; POU5 (Oct-3/4-like factors){3.1.10.5}
Length: 16
Consensus: cywTTswtATGCAaAt
Weblogo: 
PSSM: P0      A      C      G      T
01     59    233    101    107      c
02     32    279     22    167      y
03    235     26     11    228      w
04      8     24      3    465      T
05     54      2     45    399      T
06     54    168    242     36      s
07    210      4     12    274      w
08     81    113     52    254      t
09    465      3     10     22      A
10      8      2     10    480      T
11      7      1    458     34      G
12      1    390     34     75      C
13    394      5     29     72      A
14    255     70     89     86      a
15    379     23     45     53      A
16     76     74     55    295      t
Binding TFs: PO5F1_HUMAN (Homeobox domain, Pou domain - N-terminal to homeobox domain)
			
Publications: Kulakovskiy IV, Vorontsov IE, Yevshin IS, Soboleva AV, Kasianov AS, Ashoor H, Ba-Alawi W, Bajic VB, Medvedeva YA, Kolpakov FA, Makeev VJ. HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models. Nucleic Acids Res : (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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