DNA Binding Motif

						

			
Accessions: UN0408.1 (JASPAR 2024)

			
Names: REM21
Organisms: Arabidopsis thaliana
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: DAP-seq
Length: 15
Consensus: htytkyTTCATCwtc
Weblogo: 
PSSM: P0      A      C      G      T
01    306    327    102    265      h
02    211    211    143    435      t
03    218    279    163    340      y
04 224.49    204    190    381      t
05    170    177    259    395      k
06 224.49    361    122    293      y
07      0      0      0   1000      T
08      0      0      0   1000      T
09      0    993  6.803      0      C
10   1000      0      0      0      A
11      0      0      0   1000      T
12      0   1000      0      0      C
13    381    129    177    313      w
14    197    238 149.66    415      t
15    190    401    163    245      c
Type: Heterodimer
Binding TFs: Q9FK61 (B3 DNA binding domain)
Q9FK61
			
	
			


			

				

				
				
				
				

			

			

		

	
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