DNA Binding Motif

						

			
Accessions: HOXC4_methyl_2 (HT-SELEX2 May2017)

			
Names: HOXC4
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 8
Consensus: rTCrTTAr
Weblogo: 
PSSM: P0      A      C      G      T
01   1134    318   1186     37      r
02    162    391    273   2320      T
03    170   2320      0    109      C
04   3699      0   2320      0      r
05     66     81      0   2320      T
06    361    157     56   2320      T
07   2320     94    102    249      A
08    826    300    627    566      r
Binding TFs: HOXC4 (Homeobox domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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