DNA Binding Motif

						

			
Accessions: PAX4_methyl_3 (HT-SELEX2 May2017)

			
Names: PAX4
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 13
Consensus: tyaCGcTAATTAr
Weblogo: 
PSSM: P0      A      C      G      T
01    255     69    258    758      t
02    347    545     97    794      y
03   1339    163    342    154      a
04    145   1339    117    367      C
05    254    125   1339     44      G
06     87   1339    314    306      c
07    210    197    140   1339      T
08   1339    192    101    151      A
09   1339     14      5     51      A
10      0     18      4   1339      T
11     47    118     43   1339      T
12   1339    126    216    255      A
13    407    238    489    205      r
Binding TFs: PAX4 (Homeobox domain, 'Paired box' domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
Disclaimer and license


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.