DNA Binding Motif
| Accessions: | MA1816.1 (JASPAR 2024) |
| Names: | O11 |
| Organisms: | Zea mays |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | ChIP-seq |
| Length: | 12 |
| Consensus: | sskCACGTGmss |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 1186 1538 1632 1104 s 02 1291 1413 1400 1356 s 03 964 1164 1901 1431 k 04 22 5216 61 161 C 05 5442 10 0 8 A 06 3 5439 15 3 C 07 4 17 5435 4 G 08 8 0 12 5440 T 09 163 60 5212 25 G 10 1431 1901 1164 964 m 11 1359 1392 1416 1293 s 12 1105 1631 1539 1185 s |
| Type: | Heterodimer |
| Binding TFs: | A0A1D6EAS7 (Helix-loop-helix DNA-binding domain) A0A1D6EAS7 |
| Binding Sites: | MA1816.1.1 MA1816.1.10 MA1816.1.11 MA1816.1.12 MA1816.1.13 MA1816.1.14 MA1816.1.15 MA1816.1.16 MA1816.1.17 MA1816.1.18 MA1816.1.19 MA1816.1.2 MA1816.1.20 MA1816.1.3 MA1816.1.4 MA1816.1.5 MA1816.1.6 MA1816.1.7 MA1816.1.8 MA1816.1.9 MA1816.1.17 MA1816.1.18 MA1816.1.19 MA1816.1.20 |
| Publications: | de Vetten N. C., Ferl R. J. Characterization of a maize G-box binding factor that is induced by hypoxia. Plant J. 7:589-601 (1995). [Pubmed] |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.