DNA Binding Motif

						

			
Accessions: NFATC3_methyl_3 (HT-SELEX2 May2017)

			
Names: NFATC3
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 21
Consensus: ryGGAAAmwtsawkTTTCCry
Weblogo: 
PSSM: P0      A      C      G      T
01   3403    355   1732    615      r
02    129   3622     34   2483      y
03      2      7   6105     14      G
04     11     30   6105     24      G
05   6105     25     32     38      A
06   6105     15      8      5      A
07   6105    656    104    545      A
08   2371   1842   1011    881      m
09   2320    857    694   2234      w
10   1404   1524   1495   1682      t
11   1397   1660   1598   1450      s
12   1704   1492   1498   1411      a
13   2230    725    870   2280      w
14    917   1020   1827   2341      k
15    564    111    659   6105      T
16     19     12     21   6105      T
17     16     28     24   6105      T
18      9   6105     20      0      C
19      0   6105     13      0      C
20   2480     30   3625    156      r
21    627   1843    326   3310      y
Binding TFs: NFATC3 (Rel homology domain (RHD), IPT/TIG domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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