DNA Binding Motif

						

			
Accessions: CTCFL_HUMAN.H10MO.A|M01069 (HOCOMOCO 10)

			
Names: CTCFL
Organisms: Homo sapiens
Libraries: HOCOMOCO 10 1
1 Kulakovskiy IV, Vorontsov IE, Yevshin IS, Soboleva AV, Kasianov AS, Ashoor H, Ba-Alawi W, Bajic VB, Medvedeva YA, Kolpakov FA, Makeev VJ. HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models. Nucleic Acids Res : (2016). [Pubmed]
Notes: More than 3 adjacent zinc finger factors{2.3.3}; CTCF-like factors{2.3.3.50}
Length: 19
Consensus: ygrCCAsyAGrkGGCrsyv
Weblogo: 
PSSM: P0      A      C      G      T
01     50    178     61    211      y
02     81    107    203    109      g
03    151     50    218     81      r
04     36    413     25     26      C
05      6    483      6      5      C
06    393     12     54     41      A
07     12    310    168     10      s
08     61    247     28    164      y
09    457      5     24     14      A
10      6      4    488      2      G
11    188      5    301      6      r
12     11     11    303    175      k
13     14      1    481      4      G
14     12      8    440     40      G
15     48    409     19     24      C
16    212     12    261     15      r
17     43    266    163     28      s
18     61    174     61    204      y
19    171    130    159     40      v
Binding TFs: CTCFL_HUMAN (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger)
			
Publications: Kulakovskiy IV, Vorontsov IE, Yevshin IS, Soboleva AV, Kasianov AS, Ashoor H, Ba-Alawi W, Bajic VB, Medvedeva YA, Kolpakov FA, Makeev VJ. HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models. Nucleic Acids Res : (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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