DNA Binding Motif

						

			
Accessions: M0630 (AthalianaCistrome v4_May2016)

			
Names: SMB.DAP, T00244;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 21
Consensus: grTwrCKTrwrwhwcAMGyaA
Weblogo: 
PSSM: P0      A      C      G      T
01    102     67    332     99      g
02    167     41    314     78      r
03     93      3      3    501      T
04    249      7     97    247      w
05    277     14    288     21      r
06     52    539      0      9      C
07      0      0    418    182      K
08      0      0      0    600      T
09    240     34    322      4      r
10    212    125     84    179      w
11    261     62    157    120      r
12    194     94    142    170      w
13    165    150     54    231      h
14    212     60     95    233      w
15     39    318    127    116      c
16    594      6      0      0      A
17    428    171      1      0      M
18      0      2    578     20      G
19     87    267     85    161      y
20    396     62     25    117      a
21    550      0      4     46      A
Binding TFs: T00244 (No apical meristem (NAM) protein)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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