DNA Binding Motif

						

			
Accessions: M0515 (AthalianaCistrome v4_May2016)

			
Names: MS188.DAP, T25962;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 15
Consensus: wawArkTAGGTrram
Weblogo: 
PSSM: P0      A      C      G      T
01    242     83    117    153      w
02    268    100     92    135      a
03    287     17    116    175      w
04    421      4     41    129      A
05    309      5    233     48      r
06      1      0    221    373      k
07      0      0      0    595      T
08    461      3      5    126      A
09      0      0    595      0      G
10      0      0    459    136      G
11      1      0      0    594      T
12    239     39    280     37      r
13    320     38    177     60      r
14    333     81    144     37      a
15    221    189     91     94      m
Binding TFs: T25962 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.