DNA Binding Motif

						

			
Accessions: PO5F1_MOUSE.H10MO.A|M01298 (HOCOMOCO 10)

			
Names: Pou5f1
Organisms: Mus musculus
Libraries: HOCOMOCO 10 1
1 Kulakovskiy IV, Vorontsov IE, Yevshin IS, Soboleva AV, Kasianov AS, Ashoor H, Ba-Alawi W, Bajic VB, Medvedeva YA, Kolpakov FA, Makeev VJ. HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models. Nucleic Acids Res : (2016). [Pubmed]
Notes: POU domain factors{3.1.10}; POU5 (Oct-3/4-like factors){3.1.10.5}
Length: 16
Consensus: yywTTgwtATGCAaAt
Weblogo: 
PSSM: P0      A      C      G      T
01    173    608    197    342      y
02    125    759     79    357      y
03    548     79     43    650      w
04      8     87     39   1186      T
05     46     36    109   1129      T
06    167    292    773     88      g
07    387     65     66    802      w
08    282    325    144    569      t
09   1165     21     17    117      A
10     34      3      8   1275      T
11      7     43   1189     81      G
12     10   1011    102    197      C
13   1046     12     22    240      A
14    841     79    273    127      a
15   1095     85     84     56      A
16    181    124    154    861      t
Binding TFs: PO5F1_MOUSE (Homeobox domain, Pou domain - N-terminal to homeobox domain)
			
Publications: Kulakovskiy IV, Vorontsov IE, Yevshin IS, Soboleva AV, Kasianov AS, Ashoor H, Ba-Alawi W, Bajic VB, Medvedeva YA, Kolpakov FA, Makeev VJ. HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models. Nucleic Acids Res : (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
Disclaimer and license


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.