DNA Binding Motif
| Accessions: | MA2422.1 (JASPAR 2024) |
| Names: | OsbZIP42 |
| Organisms: | Oryza sativa |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | DAP-seq |
| Length: | 10 |
| Consensus: | tGmCACGTCA |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 764 2001 1244 5692 t 02 387 406 8419 489 G 03 4583 4650 199 269 m 04 63 9475 63 100 C 05 9296 88 180 137 A 06 161 8850 232 458 C 07 631 457 8543 70 G 08 151 136 211 9203 T 09 716 8356 441 188 C 10 8370 237 823 271 A |
| Binding TFs: | Q0DH66 |
| Binding Sites: | MA2422.1.12 MA2422.1.1 / MA2422.1.10 / MA2422.1.15 / MA2422.1.19 / MA2422.1.2 MA2422.1.11 MA2422.1.13 MA2422.1.14 MA2422.1.16 MA2422.1.17 MA2422.1.18 MA2422.1.20 / MA2422.1.8 / MA2422.1.9 MA2422.1.3 MA2422.1.4 MA2422.1.5 MA2422.1.6 MA2422.1.7 |
| Publications: | O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed] |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.