DNA Binding Motif

						

			
Accessions: M0681 (AthalianaCistrome v4_May2016)

			
Names: NTM1.ampDAP, T18768;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 21
Consensus: aaaaaaaarraAAAAGyaaaw
Weblogo: 
PSSM: P0      A      C      G      T
01    318     85     87    108      a
02    274     99    115    110      a
03    309     94     83    112      a
04    367     54     83     94      a
05    349     55    116     78      a
06    358     47    104     89      a
07    337     48    131     82      a
08    289     68    115    126      a
09    224     94    160    120      r
10    166    137    176    119      r
11    405     72     68     53      a
12    484      0     15     99      A
13    598      0      0      0      A
14    598      0      0      0      A
15    546      0     52      0      A
16      0      0    598      0      G
17     25    166     11    396      y
18    380     17    121     80      a
19    382     43    111     62      a
20    327    115     57     99      a
21    300     54     87    157      w
Binding TFs: T18768 (No apical meristem (NAM) protein)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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