DNA Binding Motif

						

			
Accessions: HOXD13_3 (HT-SELEX2 May2017)

			
Names: HOXD13
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 11
Consensus: sCTCGTAAAay
Weblogo: 
PSSM: P0      A      C      G      T
01    548   1704   1972    927      s
02    243   5151    530     16      C
03     33      0      0   5151      T
04      7   5151      0    199      C
05    281      0   5151      0      G
06      0      0      0   5151      T
07   5151      0     11    412      A
08   5151      0      4      2      A
09   5151     75      6      0      A
10   5151   1676    561   1240      a
11    778   2394    605   1373      y
Binding TFs: HOXD13 (Homeobox domain, Hox protein A13 N terminal)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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