DNA Binding Motif

						

			
Accessions: Vsx1_DBD (HumanTF 1.0)

			
Names: Vsx1
Organisms: Mus musculus
Libraries: HumanTF 1.0 1
1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]
Notes: Site type: monomeric; SELEX cycle: 2
Length: 8
Consensus: yyAATTAr
Weblogo: 
PSSM: P0      A      C      G      T
01   1772   4996   2152   3109      y
02   1094   6246    626   5782      y
03  12029   1424   1053   1041      A
04  12029    825    309    361      A
05    134    101     31  12029      T
06    559   1014    506  12029      T
07  12029    464    217    987      A
08   3847   2961   3109   2112      r
Binding TFs: Vsx1_DBD (Homeobox domain)
			
Publications: Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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