DNA Binding Motif

						

			
Accessions: 6m3d_C (3D-footprint 20231221)

			
Names: Segmentation polarity homeobox protein engrailed,Segmentation polarity homeobox protein engrailed
Organisms: Drosophila melanogaster
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: X-ray crystal structure of tandemly connected engrailed homeodomains (EHD) with R53A mutations and DNA complex
Length: 7
Consensus: CyAATCc
Weblogo: 
PSSM: P0      A      C      G      T
01      0     71      8     17      C
02     10     52      8     26      y
03     96      0      0      0      A
04     96      0      0      0      A
05      0      0      0     96      T
06      0     96      0      0      C
07     17     61     10      8      c
Binding TFs: 6m3d_C (Homeobox domain)
Binding Sites: 6m3d_A
6m3d_B
			
Publications: Sunami T, Hirano Y, Tamada T, Kono H. Structural basis for designing an array of engrailed homeodomains. Acta Crystallogr D Struct Biol : (2020). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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