DNA Binding Motif

						

			
Accessions: M0640 (AthalianaCistrome v4_May2016)

			
Names: ANAC083.DAP, T23394;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 19
Consensus: TTrCkTgtwwtwyACGywA
Weblogo: 
PSSM: P0      A      C      G      T
01     63     17      6    511      T
02     97      5     33    462      T
03    234     86    163    114      r
04     20    577      0      0      C
05      0      0    303    294      k
06      0      0      0    597      T
07    135     80    363     19      g
08    122     78     35    362      t
09    156     97    148    196      w
10    151    149    126    171      w
11    131    149     66    251      t
12    292     44     93    168      w
13      3    339     14    241      y
14    597      0      0      0      A
15     94    503      0      0      C
16      1      0    546     50      G
17     51    194     44    308      y
18    332     90      0    175      w
19    468      8      1    120      A
Binding TFs: T23394 (No apical meristem (NAM) protein)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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