DNA Binding Motif
| Accessions: | MA1104.1 (JASPAR 2024) |
| Names: | GATA6 |
| Organisms: | Homo sapiens |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | ChIP-seq |
| Length: | 13 |
| Consensus: | wwvAGATAAGawa |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 5342 3899 4256 5153 w 02 6098 2976 4600 4976 w 03 5177 5000 5168 3305 v 04 16088 229 221 2112 A 05 210 102 18286 52 G 06 18250 122 154 124 A 07 327 139 262 17922 T 08 17543 186 205 716 A 09 17864 79 345 362 A 10 952 1788 15490 420 G 11 12541 1873 3554 682 a 12 6323 3098 4465 4764 w 13 6957 3369 3798 4526 a |
| Type: | Heterodimer |
| Binding TFs: | Q92908 (GATA zinc finger, GATA-type transcription activator, N-terminal ) Q92908 |
| Binding Sites: | MA1104.1.1 MA1104.1.10 MA1104.1.11 MA1104.1.12 MA1104.1.13 MA1104.1.14 MA1104.1.15 MA1104.1.16 MA1104.1.17 MA1104.1.18 MA1104.1.19 MA1104.1.2 MA1104.1.20 MA1104.1.3 MA1104.1.4 MA1104.1.5 MA1104.1.6 MA1104.1.7 MA1104.1.8 MA1104.1.9 |
| Publications: | Merika M., Orkin S. H. DNA-binding specificity of GATA family transcription factors. Mol. Cell. Biol. 13:3999-4010 (1993). [Pubmed] |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.