DNA Binding Motif

						

			
Accessions: UN0690.1 (JASPAR 2024)

			
Names: NFYC2
Organisms: Arabidopsis thaliana
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Length: 11
Consensus: cACGTGGCAww
Weblogo: 
PSSM: P0      A      C      G      T
01    633   2373    837    837      c
02   3455    259    443    523      A
03    169   4264     87    160      C
04    116     31   4428    105      G
05     79    105     23   4473      T
06    120     53   4421     86      G
07    236    103   3438    903      G
08    343   4053    174    110      C
09   3557    184    508    431      A
10   1466    882    948   1384      w
11   1473    966    876   1365      w
Type: Heterodimer
Binding TFs: Q8LCG7 (Core histone H2A/H2B/H3/H4, Histone-like transcription factor (CBF/NF-Y) and archaeal histone)
Q8LCG7
Binding Sites: UN0690.1.2
UN0690.1.8
UN0690.1.1
UN0690.1.10
UN0690.1.11
UN0690.1.12
UN0690.1.13
UN0690.1.14
UN0690.1.15
UN0690.1.16
UN0690.1.17
UN0690.1.18
UN0690.1.19
UN0690.1.20
UN0690.1.3
UN0690.1.4
UN0690.1.5
UN0690.1.6
UN0690.1.7
UN0690.1.9
			
	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.