DNA Binding Motif

						

			
Accessions: ETV5_DRGX_2 (HumanTF2 1.0)

			
Names: ETV5_DRGX
Organisms: Homo sapiens
Libraries: HumanTF2 1.0 1
1 Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]
Notes: Site type: heterodimeric; Experiment type: CAP-SELEX
Length: 14
Consensus: TaAtkrsCGGAwGy
Weblogo: 
PSSM: P0      A      C      G      T
01     57      0     50    245      T
02    245     12     54     65      a
03    245     26     14     48      A
04     35     15     89    245      t
05     29     35     99    146      k
06    169     23     76     15      r
07     10    161     83      0      s
08     49    245     22      2      C
09      0      6    245      0      G
10      0      0    245     17      G
11    245     10      0      0      A
12    171      4      9     73      w
13      2     18    245     15      G
14     31     97     16    100      y
Type: Heterodimer
Binding TFs: DRGX_TF2 (Homeobox domain)
ETV5_TF1 (Ets-domain)
			
Publications: Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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