DNA Binding Motif
| Accessions: | MA0467.2 (JASPAR 2024) |
| Names: | Crx |
| Organisms: | Mus musculus |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Length: | 10 |
| Consensus: | grGGATTArv |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 1048 923 1358 1004 g 02 1497 670 1399 767 r 03 19 155 4129 30 G 04 26 36 4200 71 G 05 4227 17 42 47 A 06 11 32 9 4281 T 07 50 25 20 4238 T 08 4241 25 23 44 A 09 1349 739 1353 892 r 10 1205 1151 1127 850 v |
| Type: | Heterodimer |
| Binding TFs: | O54751 (Homeobox domain, Otx1 transcription factor) O54751 |
| Binding Sites: | MA0467.2.1 MA0467.2.10 / MA0467.2.2 / MA0467.2.8 MA0467.2.11 / MA0467.2.9 MA0467.2.10 / MA0467.2.12 MA0467.2.11 / MA0467.2.13 / MA0467.2.3 / MA0467.2.4 MA0467.2.12 / MA0467.2.14 MA0467.2.13 / MA0467.2.15 MA0467.2.14 / MA0467.2.16 MA0467.2.17 MA0467.2.15 / MA0467.2.18 MA0467.2.19 MA0467.2.16 / MA0467.2.20 MA0467.2.3 MA0467.2.5 MA0467.2.6 MA0467.2.5 / MA0467.2.7 MA0467.2.6 / MA0467.2.8 MA0467.2.7 / MA0467.2.9 MA0467.2.17 MA0467.2.18 MA0467.2.19 MA0467.2.20 MA0467.2.4 |
| Publications: | Lee J, Myers C.A, Williams N, Abdelaziz M, Corbo J.C. Quantitative fine-tuning of photoreceptor cis-regulatory elements through affinity modulation of transcription factor binding sites. Gene therapy 17:1390-9 (2010). [Pubmed] |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.