DNA Binding Motif
| Accessions: | MA1279.2 (JASPAR 2024) |
| Names: | DOF1.5 |
| Organisms: | Arabidopsis thaliana |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | DAP-seq |
| Length: | 16 |
| Consensus: | aaaarAAAAAGtraaa |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 329 75 121 75 a 02 329 55 114 102 a 03 301 61 143 95 a 04 251 73 147 129 a 05 184 94 199 123 r 06 440 34 71 55 A 07 486 8 1 105 A 08 599 1 0 0 A 09 599 0 1 0 A 10 591 0 9 0 A 11 0 0 600 0 G 12 46 35 140 379 t 13 232 22 273 73 r 14 325 122 41 112 a 15 400 81 38 81 a 16 340 71 54 135 a |
| Type: | Heterodimer |
| Binding TFs: | P68350 (Dof domain, zinc finger) P68350 |
| Binding Sites: | MA1279.2.1 MA1279.2.10 MA1279.2.11 MA1279.2.12 MA1279.2.13 MA1279.2.14 MA1279.2.15 MA1279.2.16 MA1279.2.17 MA1279.2.18 MA1279.2.19 MA1279.2.2 MA1279.2.20 MA1279.2.3 MA1279.2.4 MA1279.2.5 MA1279.2.6 MA1279.2.7 MA1279.2.8 MA1279.2.9 |
| Publications: | Yanagisawa S. Dof1 and Dof2 transcription factors are associated with expression of multiple genes involved in carbon metabolism in maize. Plant J. 21:281-288 (2000). [Pubmed] |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.