DNA Binding Motif

						

			
Accessions: NKX2-5_3 (HT-SELEX2 May2017)

			
Names: NKX2-5
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 10
Consensus: asCACTTras
Weblogo: 
PSSM: P0      A      C      G      T
01    829    558    530    495      a
02    676   2412   1089    176      s
03      0   2412     14     86      C
04   2412      0      0     81      A
05     17   2412      0      0      C
06     10      0     51   2412      T
07      0    292      0   2412      T
08   1062    449   1351     89      r
09   2412    496    603    723      a
10    568    807    812    225      s
Binding TFs: NKX2-5 (Homeobox domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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