DNA Binding Motif
| Accessions: | UN0376.1 (JASPAR 2024), MA2049.1 (JASPAR 2024) |
| Names: | NAC053 |
| Organisms: | Arabidopsis thaliana |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Length: | 12 |
| Consensus: | haCAAGAAAymw |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 1157 1073 639 1093 h 02 1383 799 960 820 a 03 2 3931 2 27 C 04 3873 8 38 43 A 05 3762 161 8 31 A 06 1 2 3927 32 G 07 3241 134 50 537 A 08 3640 56 17 249 A 09 3814 31 21 96 A 10 819 1483 640 1020 y 11 1125 1249 687 901 m 12 1168 634 812 1348 w |
| Type: | Heterodimer |
| Binding TFs: | Q949N0 (No apical meristem (NAM) protein) Q949N0 |
| Binding Sites: | MA2049.1.4 / UN0376.1.5 MA2049.1.5 / UN0376.1.6 MA2049.1.6 / UN0376.1.7 MA2049.1.7 / UN0376.1.8 MA2049.1.8 / UN0376.1.9 MA2049.1.9 / UN0376.1.10 MA2049.1.10 / UN0376.1.11 MA2049.1.12 / UN0376.1.12 MA2049.1.13 / UN0376.1.13 UN0376.1.14 MA2049.1.1 / UN0376.1.1 UN0376.1.2 MA2049.1.2 / UN0376.1.3 MA2049.1.3 / UN0376.1.4 UN0376.1.16 UN0376.1.17 UN0376.1.18 MA2049.1.14 / UN0376.1.15 MA2049.1.15 / UN0376.1.19 UN0376.1.20 MA2049.1.16 MA2049.1.11 MA2049.1.17 MA2049.1.18 MA2049.1.19 MA2049.1.20 |
| Publications: | Lindemose S, Jensen MK, Van de Velde J, O'Shea C, Heyndrickx KS, Workman CT, Vandepoele K, Skriver K, De Masi F. A DNA-binding-site landscape and regulatory network analysis for NAC transcription factors in Arabidopsis thaliana. Nucleic Acids Res 42:7681-93 (2014). [Pubmed] |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.