DNA Binding Motif

						

			
Accessions: MA1927.1 (JASPAR 2024)

			
Names: YY1-2
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: SELEX
Length: 22
Consensus: srgcsgCCATwATGGcggcyby
Weblogo: 
PSSM: P0      A      C      G      T
01    244    271    280    205      s
02    266    224    288    223      r
03    172    206    386    236      g
04    170    529    181    121      c
05    147    493    286     74      s
06    122     98    565    215      g
07     64    832     56     48      C
08     49    918     16     18      C
09    909      9     24     57      A
10    100     19     11    870      T
11    514     33     56    398      w
12    939      7     15     40      A
13      8     13      8    971      T
14      8      3    985      5      G
15     21     16    920     43      G
16    199    623     56    122      c
17     58    229    567    146      g
18    114    138    576    172      g
19    240    405    178    177      c
20    206    300    237    256      y
21    171    268    306    255      b
22    198    268    238    296      y
			
Publications: Belak ZR, Ovsenek N, Eskiw CH. Conserved RNA binding activity of a Yin-Yang 1 homologue in the ova of the purple sea urchin Strongylocentrotus purpuratus. Sci Rep 8:8061 (2018). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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