DNA Binding Motif

						

			
Accessions: M0214 (AthalianaCistrome v4_May2016)

			
Names: T23365;, TGA5.DAP
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 14
Consensus: drTGACGTCAkCaw
Weblogo: 
PSSM: P0      A      C      G      T
01    186     65    184    153      d
02    269     69    240     10      r
03      0      0      0    588      T
04      0      0    583      5      G
05    588      0      0      0      A
06      0    574      0     14      C
07     18      0    570      0      G
08      0      0      0    588      T
09     60    525      2      1      C
10    584      0      0      4      A
11      0     79    191    318      k
12     23    449     63     53      C
13    292     53    119    124      a
14    149     77     92    270      w
Binding TFs: T23365 (bZIP transcription factor, Basic region leucine zipper, Seed dormancy control)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
Disclaimer and license


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.