DNA Binding Motif

						

			
Accessions: TGIF2LX_methyl_1 (HT-SELEX2 May2017)

			
Names: TGIF2LX
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 12
Consensus: TGACAscTGTCA
Weblogo: 
PSSM: P0      A      C      G      T
01    531   1139    202   4513      T
02    137    459   4513     85      G
03   4513     87    191    538      A
04     32   4513     54    146      C
05   4513      9    573     84      A
06     60   1168   2159   1125      s
07   1126   2265   1067     55      c
08     45    558     19   4513      T
09    150     58   4513     33      G
10    501    227     54   4513      T
11     67   4513    425     87      C
12   4513    197   1107    471      A
Binding TFs: TGIF2LX (Homeobox domain, Homeobox KN domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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