DNA Binding Motif

						

			
Accessions: M0730 (AthalianaCistrome v4_May2016)

			
Names: AT3G09735.DAP, T14318;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 15
Consensus: rGAAgmTTCTAGAAr
Weblogo: 
PSSM: P0      A      C      G      T
01    331     46    197     24      r
02      0      0    598      0      G
03    592      1      1      4      A
04    564      0      4     30      A
05     40    130    358     70      g
06    155    217    120    106      m
07     59     22     10    507      T
08      8      0      2    588      T
09      0    595      3      0      C
10      0     84     20    494      T
11    466     19    112      1      A
12      0      3    595      0      G
13    586      3      2      7      A
14    414     26     79     79      A
15    150    114    225    109      r
Binding TFs: T14318 (DNA binding protein S1FA)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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