DNA Binding Motif

						

			
Accessions: NR2E1_methyl_1 (HT-SELEX2 May2017)

			
Names: NR2E1
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 9
Consensus: adAAGTCAm
Weblogo: 
PSSM: P0      A      C      G      T
01   2978   1596   1757   1644      a
02   7976   2855   6648   6043      d
03   7976    583   1683    149      A
04   7976    847   1564    642      A
05     71      0   7976      0      G
06      0   1180    326   7976      T
07      0   7976      0    419      C
08   7976      0   1790      0      A
09   2775   2105   1554   1542      m
Binding TFs: NR2E1 (Ligand-binding domain of nuclear hormone receptor, Zinc finger, C4 type (two domains))
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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